Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col12a1Q60847 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col12a1Q60847 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col12a1Q60847 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm21778-201ENSMUST00000178779 471 ntBASIC11.55□□□□□ -0.56
Col12a1Q60847 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC11.55□□□□□ -0.56
Col12a1Q60847 Capsl-202ENSMUST00000226688 739 ntBASIC11.55□□□□□ -0.56
Col12a1Q60847 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm4294-201ENSMUST00000105169 614 ntBASIC11.55□□□□□ -0.56
Col12a1Q60847 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.55□□□□□ -0.56
Col12a1Q60847 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.55□□□□□ -0.56
Col12a1Q60847 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.55□□□□□ -0.56
Col12a1Q60847 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.55□□□□□ -0.56
Col12a1Q60847 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm23912-201ENSMUST00000104687 87 ntBASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gm5468-202ENSMUST00000227851 682 ntBASIC11.55□□□□□ -0.56
Col12a1Q60847 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col12a1Q60847 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.55□□□□□ -0.56
Col12a1Q60847 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm24294-201ENSMUST00000158295 277 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm25872-201ENSMUST00000177784 100 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.54□□□□□ -0.56
Col12a1Q60847 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm23062-201ENSMUST00000102349 110 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm24933-201ENSMUST00000103762 110 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm23252-201ENSMUST00000103776 110 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm23647-201ENSMUST00000175042 109 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Rn5s-201ENSMUST00000177555 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm22109-201ENSMUST00000177995 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm22291-201ENSMUST00000178027 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm23284-201ENSMUST00000178069 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms