Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.5□□□□□ -0.57
Nr1h4Q60641 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.49□□□□□ -0.57
Nr1h4Q60641 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nr1h4Q60641 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.49□□□□□ -0.57
Nr1h4Q60641 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.49□□□□□ -0.57
Nr1h4Q60641 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.49□□□□□ -0.57
Nr1h4Q60641 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Gm6091-201ENSMUST00000098307 165 ntBASIC11.49□□□□□ -0.57
Nr1h4Q60641 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.49□□□□□ -0.57
Nr1h4Q60641 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.49□□□□□ -0.57
Nr1h4Q60641 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.49□□□□□ -0.57
Nr1h4Q60641 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.49□□□□□ -0.57
Nr1h4Q60641 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.49□□□□□ -0.57
Nr1h4Q60641 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nr1h4Q60641 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Gm13736-201ENSMUST00000119272 253 ntBASIC11.48□□□□□ -0.57
Nr1h4Q60641 Gm13342-201ENSMUST00000121055 207 ntBASIC11.48□□□□□ -0.57
Nr1h4Q60641 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.48□□□□□ -0.57
Nr1h4Q60641 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.48□□□□□ -0.57
Nr1h4Q60641 Gm18165-201ENSMUST00000217426 928 ntBASIC11.48□□□□□ -0.57
Nr1h4Q60641 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.48□□□□□ -0.57
Nr1h4Q60641 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.48□□□□□ -0.57
Nr1h4Q60641 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms