Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Gm23251-201ENSMUST00000103773 110 ntBASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Gm7851-201ENSMUST00000117574 323 ntBASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Gm23085-201ENSMUST00000157849 293 ntBASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Gm26448-201ENSMUST00000082446 203 ntBASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Gm11511-201ENSMUST00000118146 540 ntBASIC12.81□□□□□ -0.36
Shroom1Q5SX79 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Gm4157-201ENSMUST00000211647 679 ntBASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Gm45770-201ENSMUST00000212105 616 ntBASIC12.81□□□□□ -0.36
Shroom1Q5SX79 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.81□□□□□ -0.36
Shroom1Q5SX79 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.81□□□□□ -0.36
Shroom1Q5SX79 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.81□□□□□ -0.36
Shroom1Q5SX79 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shroom1Q5SX79 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Gm26286-201ENSMUST00000104166 134 ntBASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Gm12165-201ENSMUST00000117047 342 ntBASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Gm14724-201ENSMUST00000118400 537 ntBASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Gm3332-201ENSMUST00000189337 928 ntBASIC12.8□□□□□ -0.36
Shroom1Q5SX79 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.8□□□□□ -0.36
Shroom1Q5SX79 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shroom1Q5SX79 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shroom1Q5SX79 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms