Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.36□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 BC043934-202ENSMUST00000185694 2356 ntBASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm8810-201ENSMUST00000172895 754 ntBASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm8420-201ENSMUST00000097103 598 ntBASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm11803-201ENSMUST00000119966 444 ntBASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms