Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Gm9166-201ENSMUST00000120293 561 ntBASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Ighv1-2-201ENSMUST00000195325 378 ntBASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Gm19009-201ENSMUST00000223072 823 ntBASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Gm8038-201ENSMUST00000164674 2044 ntBASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim41Q5NCC3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Gm23255-201ENSMUST00000102244 110 ntBASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Gm5706-201ENSMUST00000181525 993 ntBASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Gm43520-201ENSMUST00000197996 164 ntBASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Gm18460-201ENSMUST00000208088 464 ntBASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim41Q5NCC3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Gm15595-201ENSMUST00000120840 961 ntBASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Gm3329-201ENSMUST00000159873 556 ntBASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Gm7430-201ENSMUST00000193824 1144 ntBASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Gm45575-201ENSMUST00000210283 548 ntBASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Gm37324-201ENSMUST00000194500 4504 ntBASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim41Q5NCC3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Gm13700-201ENSMUST00000118624 1128 ntBASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Gm6485-201ENSMUST00000160676 439 ntBASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Gm36982-201ENSMUST00000193796 1128 ntBASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim41Q5NCC3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Gm11956-201ENSMUST00000119525 512 ntBASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim41Q5NCC3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms