Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps13aQ5H8C4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps13aQ5H8C4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Vps13aQ5H8C4 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vps13aQ5H8C4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps13aQ5H8C4 Gm15136-201ENSMUST00000120552 533 ntBASIC11.59□□□□□ -0.55
Vps13aQ5H8C4 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps13aQ5H8C4 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.59□□□□□ -0.55
Vps13aQ5H8C4 Gm9487-201ENSMUST00000216600 472 ntBASIC11.59□□□□□ -0.55
Vps13aQ5H8C4 Gm8255-201ENSMUST00000218693 305 ntBASIC11.59□□□□□ -0.55
Vps13aQ5H8C4 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vps13aQ5H8C4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Vps13aQ5H8C4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Vps13aQ5H8C4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Vps13aQ5H8C4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Gm16030-201ENSMUST00000159098 603 ntBASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Gm15815-201ENSMUST00000120569 255 ntBASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps13aQ5H8C4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm25492-201ENSMUST00000157383 129 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm6158-201ENSMUST00000109467 904 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm7572-201ENSMUST00000182616 766 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm38103-201ENSMUST00000191707 864 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm17931-201ENSMUST00000208132 634 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm13422-201ENSMUST00000118834 504 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm26313-201ENSMUST00000157770 308 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm6612-201ENSMUST00000170777 395 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm43866-201ENSMUST00000203894 839 ntBASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Vps13aQ5H8C4 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms