Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm14247-201ENSMUST00000120950 237 ntBASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm3096-201ENSMUST00000185770 364 ntBASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm31256-201ENSMUST00000194705 506 ntBASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm5186-201ENSMUST00000218781 920 ntBASIC11.34□□□□□ -0.59
Brf2Q3UAW9 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.34□□□□□ -0.59
Brf2Q3UAW9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.34□□□□□ -0.59
Brf2Q3UAW9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.33□□□□□ -0.59
Brf2Q3UAW9 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Brf2Q3UAW9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Gm15610-201ENSMUST00000120584 195 ntBASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Gm9230-201ENSMUST00000188228 532 ntBASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Gm6621-201ENSMUST00000193251 772 ntBASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Rgr-203ENSMUST00000225070 4704 ntBASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Brf2Q3UAW9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms