Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.68□□□□□ -0.7
Rab42Q0PD08 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.68□□□□□ -0.7
Rab42Q0PD08 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Gm26185-201ENSMUST00000157692 266 ntBASIC10.68□□□□□ -0.7
Rab42Q0PD08 Gm22331-201ENSMUST00000158066 136 ntBASIC10.68□□□□□ -0.7
Rab42Q0PD08 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Gm27847-201ENSMUST00000183711 107 ntBASIC10.68□□□□□ -0.7
Rab42Q0PD08 Gm27375-201ENSMUST00000183799 107 ntBASIC10.68□□□□□ -0.7
Rab42Q0PD08 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Gm21039-201ENSMUST00000223359 2012 ntBASIC10.68□□□□□ -0.7
Rab42Q0PD08 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.68□□□□□ -0.7
Rab42Q0PD08 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Gm43112-201ENSMUST00000196665 3122 ntBASIC10.68□□□□□ -0.7
Rab42Q0PD08 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.68□□□□□ -0.7
Rab42Q0PD08 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rab42Q0PD08 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.67□□□□□ -0.7
Rab42Q0PD08 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Rab42Q0PD08 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Gm14921-201ENSMUST00000118643 908 ntBASIC10.67□□□□□ -0.7
Rab42Q0PD08 Gm13369-201ENSMUST00000119442 987 ntBASIC10.67□□□□□ -0.7
Rab42Q0PD08 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms