Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Gm14247-201ENSMUST00000120950 237 ntBASIC11.12□□□□□ -0.63
Col10a1Q05306 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Gm38241-201ENSMUST00000192641 898 ntBASIC11.12□□□□□ -0.63
Col10a1Q05306 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.12□□□□□ -0.63
Col10a1Q05306 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Gm42599-201ENSMUST00000201308 469 ntBASIC11.12□□□□□ -0.63
Col10a1Q05306 Gm44262-201ENSMUST00000204969 372 ntBASIC11.12□□□□□ -0.63
Col10a1Q05306 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.12□□□□□ -0.63
Col10a1Q05306 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col10a1Q05306 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col10a1Q05306 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Col10a1Q05306 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Col10a1Q05306 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.11□□□□□ -0.63
Col10a1Q05306 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.11□□□□□ -0.63
Col10a1Q05306 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.11□□□□□ -0.63
Col10a1Q05306 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col10a1Q05306 Gm14130-201ENSMUST00000118417 987 ntBASIC11.11□□□□□ -0.63
Col10a1Q05306 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.11□□□□□ -0.63
Col10a1Q05306 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.11□□□□□ -0.63
Col10a1Q05306 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.11□□□□□ -0.63
Col10a1Q05306 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.11□□□□□ -0.63
Col10a1Q05306 Gm9257-201ENSMUST00000221254 232 ntBASIC11.11□□□□□ -0.63
Col10a1Q05306 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.11□□□□□ -0.63
Col10a1Q05306 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.11□□□□□ -0.63
Col10a1Q05306 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col10a1Q05306 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Col10a1Q05306 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Col10a1Q05306 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Col10a1Q05306 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.11□□□□□ -0.63
Col10a1Q05306 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col10a1Q05306 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Col10a1Q05306 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms