Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.79□□□□□ -0.68
SgcbP82349 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 AC106830.1-201ENSMUST00000228032 1003 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Gm8385-201ENSMUST00000058999 643 ntBASIC10.79□□□□□ -0.68
SgcbP82349 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SgcbP82349 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SgcbP82349 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.79□□□□□ -0.68
SgcbP82349 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SgcbP82349 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SgcbP82349 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
SgcbP82349 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SgcbP82349 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
SgcbP82349 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SgcbP82349 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcbP82349 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.78□□□□□ -0.68
SgcbP82349 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Gm15236-201ENSMUST00000117309 379 ntBASIC10.78□□□□□ -0.68
SgcbP82349 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.78□□□□□ -0.68
SgcbP82349 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.78□□□□□ -0.68
SgcbP82349 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Gm29199-201ENSMUST00000187766 775 ntBASIC10.78□□□□□ -0.68
SgcbP82349 Gm19080-201ENSMUST00000196082 550 ntBASIC10.78□□□□□ -0.68
SgcbP82349 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.78□□□□□ -0.68
SgcbP82349 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Gm45433-201ENSMUST00000209386 247 ntBASIC10.78□□□□□ -0.68
SgcbP82349 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
SgcbP82349 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.78□□□□□ -0.68
SgcbP82349 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcbP82349 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SgcbP82349 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SgcbP82349 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.77□□□□□ -0.68
SgcbP82349 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
SgcbP82349 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SgcbP82349 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.77□□□□□ -0.69
SgcbP82349 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.77□□□□□ -0.69
SgcbP82349 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.77□□□□□ -0.69
SgcbP82349 Gm13996-201ENSMUST00000118456 430 ntBASIC10.77□□□□□ -0.69
SgcbP82349 Gm13333-201ENSMUST00000119424 781 ntBASIC10.77□□□□□ -0.69
SgcbP82349 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.77□□□□□ -0.69
SgcbP82349 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.77□□□□□ -0.69
SgcbP82349 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.77□□□□□ -0.69
SgcbP82349 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.77□□□□□ -0.69
SgcbP82349 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SgcbP82349 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.77□□□□□ -0.69
SgcbP82349 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.77□□□□□ -0.69
SgcbP82349 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.77□□□□□ -0.69
SgcbP82349 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SgcbP82349 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SgcbP82349 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms