Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gm24845-201ENSMUST00000158034 109 ntBASIC10.06□□□□□ -0.8
Pdlim4P70271 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gm44882-201ENSMUST00000205702 802 ntBASIC10.06□□□□□ -0.8
Pdlim4P70271 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.06□□□□□ -0.8
Pdlim4P70271 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gm9996-201ENSMUST00000070359 913 ntBASIC10.06□□□□□ -0.8
Pdlim4P70271 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.06□□□□□ -0.8
Pdlim4P70271 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Pdlim4P70271 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.05□□□□□ -0.8
Pdlim4P70271 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Gm14109-201ENSMUST00000118814 309 ntBASIC10.05□□□□□ -0.8
Pdlim4P70271 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Gm25668-201ENSMUST00000157700 129 ntBASIC10.05□□□□□ -0.8
Pdlim4P70271 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.05□□□□□ -0.8
Pdlim4P70271 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Pdlim4P70271 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pdlim4P70271 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.04□□□□□ -0.8
Pdlim4P70271 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.04□□□□□ -0.8
Pdlim4P70271 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.04□□□□□ -0.8
Pdlim4P70271 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms