Protein–RNA interactions for Protein: P70122

Sbds, Ribosome maturation protein SBDS, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SbdsP70122 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SbdsP70122 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SbdsP70122 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SbdsP70122 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SbdsP70122 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SbdsP70122 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SbdsP70122 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SbdsP70122 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SbdsP70122 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.57□□□□□ -0.4
SbdsP70122 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SbdsP70122 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SbdsP70122 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.56□□□□□ -0.4
SbdsP70122 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.56□□□□□ -0.4
SbdsP70122 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SbdsP70122 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.56□□□□□ -0.4
SbdsP70122 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SbdsP70122 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SbdsP70122 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.56□□□□□ -0.4
SbdsP70122 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
SbdsP70122 Gm6023-201ENSMUST00000118217 606 ntBASIC12.56□□□□□ -0.4
SbdsP70122 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.56□□□□□ -0.4
SbdsP70122 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SbdsP70122 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.56□□□□□ -0.4
SbdsP70122 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Gm28882-201ENSMUST00000185504 314 ntBASIC12.56□□□□□ -0.4
SbdsP70122 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.56□□□□□ -0.4
SbdsP70122 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.56□□□□□ -0.4
SbdsP70122 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.56□□□□□ -0.4
SbdsP70122 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.56□□□□□ -0.4
SbdsP70122 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SbdsP70122 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SbdsP70122 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.56□□□□□ -0.4
SbdsP70122 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.56□□□□□ -0.4
SbdsP70122 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.56□□□□□ -0.4
SbdsP70122 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SbdsP70122 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SbdsP70122 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SbdsP70122 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.55□□□□□ -0.4
SbdsP70122 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Gm14660-201ENSMUST00000119809 575 ntBASIC12.55□□□□□ -0.4
SbdsP70122 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.55□□□□□ -0.4
SbdsP70122 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.55□□□□□ -0.4
SbdsP70122 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SbdsP70122 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.55□□□□□ -0.4
SbdsP70122 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
SbdsP70122 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SbdsP70122 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SbdsP70122 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SbdsP70122 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SbdsP70122 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.54□□□□□ -0.4
SbdsP70122 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SbdsP70122 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SbdsP70122 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.54□□□□□ -0.4
SbdsP70122 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SbdsP70122 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.54□□□□□ -0.4
SbdsP70122 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms