Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hmgb1P63158 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.29□□□□□ -0.28
Hmgb1P63158 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Gm23931-201ENSMUST00000103842 109 ntBASIC13.29□□□□□ -0.28
Hmgb1P63158 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmgb1P63158 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.29□□□□□ -0.28
Hmgb1P63158 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmgb1P63158 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Gm5706-201ENSMUST00000181525 993 ntBASIC13.29□□□□□ -0.28
Hmgb1P63158 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.29□□□□□ -0.28
Hmgb1P63158 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.29□□□□□ -0.28
Hmgb1P63158 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Gm9996-201ENSMUST00000070359 913 ntBASIC13.29□□□□□ -0.28
Hmgb1P63158 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hmgb1P63158 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hmgb1P63158 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmgb1P63158 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.29□□□□□ -0.28
Hmgb1P63158 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmgb1P63158 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmgb1P63158 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hmgb1P63158 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Hmgb1P63158 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Gm5187-201ENSMUST00000117317 991 ntBASIC13.28□□□□□ -0.28
Hmgb1P63158 Gm14247-201ENSMUST00000120950 237 ntBASIC13.28□□□□□ -0.28
Hmgb1P63158 Gm14832-201ENSMUST00000121289 322 ntBASIC13.28□□□□□ -0.28
Hmgb1P63158 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hmgb1P63158 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.28□□□□□ -0.28
Hmgb1P63158 Gm38158-201ENSMUST00000194617 339 ntBASIC13.28□□□□□ -0.28
Hmgb1P63158 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.28□□□□□ -0.28
Hmgb1P63158 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Hmgb1P63158 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.28□□□□□ -0.28
Hmgb1P63158 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hmgb1P63158 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Hmgb1P63158 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hmgb1P63158 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hmgb1P63158 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Hmgb1P63158 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmgb1P63158 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgb1P63158 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Hmgb1P63158 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
Hmgb1P63158 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgb1P63158 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Hmgb1P63158 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Hmgb1P63158 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgb1P63158 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgb1P63158 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hmgb1P63158 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.27□□□□□ -0.29
Hmgb1P63158 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.27□□□□□ -0.29
Hmgb1P63158 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.27□□□□□ -0.29
Hmgb1P63158 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.27□□□□□ -0.29
Hmgb1P63158 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmgb1P63158 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.27□□□□□ -0.29
Hmgb1P63158 Gm5745-201ENSMUST00000183748 313 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms