Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Rpl39P62892 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC8.55□□□□□ -1.04
Rpl39P62892 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Gm45053-201ENSMUST00000206112 2499 ntBASIC8.55□□□□□ -1.04
Rpl39P62892 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
Rpl39P62892 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
Rpl39P62892 Gm14057-201ENSMUST00000120631 482 ntBASIC8.55□□□□□ -1.04
Rpl39P62892 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC8.55□□□□□ -1.04
Rpl39P62892 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC8.55□□□□□ -1.04
Rpl39P62892 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC8.55□□□□□ -1.04
Rpl39P62892 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC8.55□□□□□ -1.04
Rpl39P62892 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC8.55□□□□□ -1.04
Rpl39P62892 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Gm37969-201ENSMUST00000195777 3409 ntBASIC8.55□□□□□ -1.04
Rpl39P62892 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Gm21939-201ENSMUST00000221137 2773 ntBASIC8.55□□□□□ -1.04
Rpl39P62892 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Gm5912-201ENSMUST00000122282 1438 ntBASIC8.54□□□□□ -1.04
Rpl39P62892 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Gm8522-201ENSMUST00000118416 1929 ntBASIC8.54□□□□□ -1.04
Rpl39P62892 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC8.54□□□□□ -1.04
Rpl39P62892 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC8.54□□□□□ -1.04
Rpl39P62892 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC8.54□□□□□ -1.04
Rpl39P62892 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Rpl39P62892 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC8.54□□□□□ -1.04
Rpl39P62892 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Gm12859-201ENSMUST00000117834 427 ntBASIC8.54□□□□□ -1.04
Rpl39P62892 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC8.54□□□□□ -1.04
Rpl39P62892 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Rpl39P62892 Mir7023-201ENSMUST00000185093 64 ntBASIC8.54□□□□□ -1.04
Rpl39P62892 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Gm44872-201ENSMUST00000207864 420 ntBASIC8.54□□□□□ -1.04
Rpl39P62892 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC8.54□□□□□ -1.04
Rpl39P62892 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC8.54□□□□□ -1.04
Rpl39P62892 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC8.54□□□□□ -1.04
Rpl39P62892 AC069562.3-201ENSMUST00000225387 587 ntBASIC8.54□□□□□ -1.04
Rpl39P62892 Gm2824-203ENSMUST00000226189 1228 ntBASIC8.54□□□□□ -1.04
Rpl39P62892 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC8.54□□□□□ -1.04
Rpl39P62892 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Rpl39P62892 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rpl39P62892 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Rpl39P62892 AC122811.1-201ENSMUST00000222257 2921 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms