Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11□□□□□ -0.65
Cdh11P55288 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Cdh11P55288 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cdh11P55288 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11□□□□□ -0.65
Cdh11P55288 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11□□□□□ -0.65
Cdh11P55288 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Cdh11P55288 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Cdh11P55288 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cdh11P55288 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11□□□□□ -0.65
Cdh11P55288 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11□□□□□ -0.65
Cdh11P55288 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Gm44775-201ENSMUST00000207266 1456 ntBASIC11□□□□□ -0.65
Cdh11P55288 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh11P55288 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdh11P55288 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cdh11P55288 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Cdh11P55288 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.99□□□□□ -0.65
Cdh11P55288 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Gm15703-201ENSMUST00000120250 880 ntBASIC10.99□□□□□ -0.65
Cdh11P55288 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.99□□□□□ -0.65
Cdh11P55288 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cdh11P55288 Gm23363-201ENSMUST00000175024 79 ntBASIC10.99□□□□□ -0.65
Cdh11P55288 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdh11P55288 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.99□□□□□ -0.65
Cdh11P55288 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.99□□□□□ -0.65
Cdh11P55288 Morn2-202ENSMUST00000227729 656 ntBASIC10.99□□□□□ -0.65
Cdh11P55288 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cdh11P55288 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdh11P55288 Gm24526-201ENSMUST00000082921 158 ntBASIC10.99□□□□□ -0.65
Cdh11P55288 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdh11P55288 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cdh11P55288 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdh11P55288 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cdh11P55288 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.99□□□□□ -0.65
Cdh11P55288 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh11P55288 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Cdh11P55288 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.98□□□□□ -0.65
Cdh11P55288 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Cdh11P55288 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.98□□□□□ -0.65
Cdh11P55288 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdh11P55288 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.98□□□□□ -0.65
Cdh11P55288 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Cdh11P55288 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdh11P55288 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cdh11P55288 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.98□□□□□ -0.65
Cdh11P55288 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.98□□□□□ -0.65
Cdh11P55288 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Gm20482-202ENSMUST00000174729 825 ntBASIC10.98□□□□□ -0.65
Cdh11P55288 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms