Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Fdft1P53798 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Fdft1P53798 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Gm24934-201ENSMUST00000103764 111 ntBASIC12.04□□□□□ -0.48
Fdft1P53798 Gm11531-201ENSMUST00000117614 555 ntBASIC12.04□□□□□ -0.48
Fdft1P53798 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.04□□□□□ -0.48
Fdft1P53798 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.04□□□□□ -0.48
Fdft1P53798 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.04□□□□□ -0.48
Fdft1P53798 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.04□□□□□ -0.48
Fdft1P53798 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Fdft1P53798 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Fdft1P53798 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.04□□□□□ -0.48
Fdft1P53798 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.04□□□□□ -0.48
Fdft1P53798 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.04□□□□□ -0.48
Fdft1P53798 Gm42599-201ENSMUST00000201308 469 ntBASIC12.04□□□□□ -0.48
Fdft1P53798 Olfr284-202ENSMUST00000206647 966 ntBASIC12.04□□□□□ -0.48
Fdft1P53798 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Gm6013-201ENSMUST00000212264 699 ntBASIC12.04□□□□□ -0.48
Fdft1P53798 Gm5950-201ENSMUST00000213337 772 ntBASIC12.04□□□□□ -0.48
Fdft1P53798 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Fdft1P53798 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Fdft1P53798 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Fdft1P53798 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.04□□□□□ -0.48
Fdft1P53798 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.04□□□□□ -0.48
Fdft1P53798 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.04□□□□□ -0.48
Fdft1P53798 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Fdft1P53798 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Fdft1P53798 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.03□□□□□ -0.48
Fdft1P53798 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Fdft1P53798 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Fdft1P53798 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Fdft1P53798 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Fdft1P53798 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Fdft1P53798 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.03□□□□□ -0.48
Fdft1P53798 Gm18935-201ENSMUST00000212692 664 ntBASIC12.03□□□□□ -0.48
Fdft1P53798 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.03□□□□□ -0.48
Fdft1P53798 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.03□□□□□ -0.48
Fdft1P53798 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.03□□□□□ -0.48
Fdft1P53798 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.03□□□□□ -0.48
Fdft1P53798 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.03□□□□□ -0.48
Fdft1P53798 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Fdft1P53798 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.03□□□□□ -0.48
Fdft1P53798 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Fdft1P53798 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.03□□□□□ -0.48
Fdft1P53798 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Fdft1P53798 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Fdft1P53798 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fdft1P53798 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fdft1P53798 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fdft1P53798 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Fdft1P53798 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fdft1P53798 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Fdft1P53798 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.02□□□□□ -0.48
Fdft1P53798 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms