Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pdx1P52946 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.89□□□□□ -0.51
Pdx1P52946 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.89□□□□□ -0.51
Pdx1P52946 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pdx1P52946 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Pdx1P52946 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.89□□□□□ -0.51
Pdx1P52946 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.89□□□□□ -0.51
Pdx1P52946 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pdx1P52946 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.89□□□□□ -0.51
Pdx1P52946 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Gm14130-201ENSMUST00000118417 987 ntBASIC11.89□□□□□ -0.51
Pdx1P52946 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.89□□□□□ -0.51
Pdx1P52946 Gm15808-201ENSMUST00000119046 604 ntBASIC11.89□□□□□ -0.51
Pdx1P52946 Gm12036-201ENSMUST00000120008 530 ntBASIC11.89□□□□□ -0.51
Pdx1P52946 Gm15610-201ENSMUST00000120584 195 ntBASIC11.89□□□□□ -0.51
Pdx1P52946 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.89□□□□□ -0.51
Pdx1P52946 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Gm17812-201ENSMUST00000204935 318 ntBASIC11.89□□□□□ -0.51
Pdx1P52946 Gm9257-201ENSMUST00000221254 232 ntBASIC11.89□□□□□ -0.51
Pdx1P52946 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Pdx1P52946 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.89□□□□□ -0.51
Pdx1P52946 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdx1P52946 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pdx1P52946 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pdx1P52946 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pdx1P52946 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.88□□□□□ -0.51
Pdx1P52946 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Pdx1P52946 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.88□□□□□ -0.51
Pdx1P52946 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pdx1P52946 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.88□□□□□ -0.51
Pdx1P52946 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.88□□□□□ -0.51
Pdx1P52946 Gm7003-201ENSMUST00000195089 312 ntBASIC11.88□□□□□ -0.51
Pdx1P52946 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.88□□□□□ -0.51
Pdx1P52946 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.88□□□□□ -0.51
Pdx1P52946 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.88□□□□□ -0.51
Pdx1P52946 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.88□□□□□ -0.51
Pdx1P52946 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdx1P52946 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.88□□□□□ -0.51
Pdx1P52946 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pdx1P52946 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Pdx1P52946 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.87□□□□□ -0.51
Pdx1P52946 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pdx1P52946 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.87□□□□□ -0.51
Pdx1P52946 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.87□□□□□ -0.51
Pdx1P52946 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms