Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.3□□□□□ -0.44
SftpbP50405 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SftpbP50405 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
SftpbP50405 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.3□□□□□ -0.44
SftpbP50405 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SftpbP50405 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SftpbP50405 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SftpbP50405 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.29□□□□□ -0.44
SftpbP50405 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SftpbP50405 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SftpbP50405 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.29□□□□□ -0.44
SftpbP50405 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SftpbP50405 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SftpbP50405 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Gm23912-201ENSMUST00000104687 87 ntBASIC12.29□□□□□ -0.44
SftpbP50405 Gm13226-201ENSMUST00000117838 404 ntBASIC12.29□□□□□ -0.44
SftpbP50405 Gm6023-201ENSMUST00000118217 606 ntBASIC12.29□□□□□ -0.44
SftpbP50405 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.29□□□□□ -0.44
SftpbP50405 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.29□□□□□ -0.44
SftpbP50405 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.29□□□□□ -0.44
SftpbP50405 Gm37008-201ENSMUST00000195712 319 ntBASIC12.29□□□□□ -0.44
SftpbP50405 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.29□□□□□ -0.44
SftpbP50405 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SftpbP50405 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.29□□□□□ -0.44
SftpbP50405 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SftpbP50405 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.29□□□□□ -0.44
SftpbP50405 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.29□□□□□ -0.44
SftpbP50405 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SftpbP50405 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SftpbP50405 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SftpbP50405 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.28□□□□□ -0.44
SftpbP50405 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Gm4986-201ENSMUST00000119731 549 ntBASIC12.28□□□□□ -0.44
SftpbP50405 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.28□□□□□ -0.44
SftpbP50405 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.28□□□□□ -0.44
SftpbP50405 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SftpbP50405 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.28□□□□□ -0.44
SftpbP50405 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.28□□□□□ -0.44
SftpbP50405 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SftpbP50405 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms