Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SftpdP50404 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.66□□□□□ -0.38
SftpdP50404 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SftpdP50404 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.65□□□□□ -0.38
SftpdP50404 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SftpdP50404 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Gm11511-201ENSMUST00000118146 540 ntBASIC12.65□□□□□ -0.38
SftpdP50404 Gm14130-201ENSMUST00000118417 987 ntBASIC12.65□□□□□ -0.38
SftpdP50404 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.65□□□□□ -0.38
SftpdP50404 Gm17812-201ENSMUST00000204935 318 ntBASIC12.65□□□□□ -0.38
SftpdP50404 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.65□□□□□ -0.38
SftpdP50404 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.65□□□□□ -0.38
SftpdP50404 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.65□□□□□ -0.38
SftpdP50404 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SftpdP50404 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.65□□□□□ -0.38
SftpdP50404 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
SftpdP50404 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpdP50404 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SftpdP50404 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SftpdP50404 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.65□□□□□ -0.39
SftpdP50404 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.64□□□□□ -0.39
SftpdP50404 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.64□□□□□ -0.39
SftpdP50404 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SftpdP50404 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.64□□□□□ -0.39
SftpdP50404 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SftpdP50404 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
SftpdP50404 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Gm13996-201ENSMUST00000118456 430 ntBASIC12.64□□□□□ -0.39
SftpdP50404 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.64□□□□□ -0.39
SftpdP50404 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.64□□□□□ -0.39
SftpdP50404 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SftpdP50404 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.64□□□□□ -0.39
SftpdP50404 Gm38241-201ENSMUST00000192641 898 ntBASIC12.64□□□□□ -0.39
SftpdP50404 Gm9136-201ENSMUST00000193368 454 ntBASIC12.64□□□□□ -0.39
SftpdP50404 Gm8956-201ENSMUST00000203939 825 ntBASIC12.64□□□□□ -0.39
SftpdP50404 Gm44262-201ENSMUST00000204969 372 ntBASIC12.64□□□□□ -0.39
SftpdP50404 Gm8913-201ENSMUST00000209491 641 ntBASIC12.64□□□□□ -0.39
SftpdP50404 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.64□□□□□ -0.39
SftpdP50404 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.64□□□□□ -0.39
SftpdP50404 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SftpdP50404 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.64□□□□□ -0.39
SftpdP50404 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.64□□□□□ -0.39
SftpdP50404 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.64□□□□□ -0.39
SftpdP50404 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.64□□□□□ -0.39
SftpdP50404 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpdP50404 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.63□□□□□ -0.39
SftpdP50404 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SftpdP50404 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.63□□□□□ -0.39
SftpdP50404 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.63□□□□□ -0.39
SftpdP50404 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.63□□□□□ -0.39
SftpdP50404 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpdP50404 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms