Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm43184-201ENSMUST00000197247 542 ntBASIC14.27□□□□□ -0.13
LtbrP50284 Gm43520-201ENSMUST00000197996 164 ntBASIC14.27□□□□□ -0.13
LtbrP50284 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.27□□□□□ -0.13
LtbrP50284 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LtbrP50284 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
LtbrP50284 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.27□□□□□ -0.13
LtbrP50284 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.27□□□□□ -0.13
LtbrP50284 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
LtbrP50284 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.26□□□□□ -0.13
LtbrP50284 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LtbrP50284 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.26□□□□□ -0.13
LtbrP50284 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
LtbrP50284 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.26□□□□□ -0.13
LtbrP50284 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC14.26□□□□□ -0.13
LtbrP50284 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.26□□□□□ -0.13
LtbrP50284 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC14.26□□□□□ -0.13
LtbrP50284 Gm2965-201ENSMUST00000198365 343 ntBASIC14.26□□□□□ -0.13
LtbrP50284 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC14.26□□□□□ -0.13
LtbrP50284 Gm44980-201ENSMUST00000205826 314 ntBASIC14.26□□□□□ -0.13
LtbrP50284 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.26□□□□□ -0.13
LtbrP50284 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.26□□□□□ -0.13
LtbrP50284 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.26□□□□□ -0.13
LtbrP50284 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LtbrP50284 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LtbrP50284 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LtbrP50284 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LtbrP50284 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LtbrP50284 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
LtbrP50284 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC14.25□□□□□ -0.13
LtbrP50284 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.25□□□□□ -0.13
LtbrP50284 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.25□□□□□ -0.13
LtbrP50284 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Gm37073-201ENSMUST00000192469 1222 ntBASIC14.25□□□□□ -0.13
LtbrP50284 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.25□□□□□ -0.13
LtbrP50284 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC14.25□□□□□ -0.13
LtbrP50284 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.25□□□□□ -0.13
LtbrP50284 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.25□□□□□ -0.13
LtbrP50284 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LtbrP50284 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Gm5455-201ENSMUST00000058710 715 ntBASIC14.25□□□□□ -0.13
LtbrP50284 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Gm8894-201ENSMUST00000074642 666 ntBASIC14.25□□□□□ -0.13
LtbrP50284 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
LtbrP50284 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LtbrP50284 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.25□□□□□ -0.13
LtbrP50284 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LtbrP50284 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.24□□□□□ -0.13
LtbrP50284 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LtbrP50284 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LtbrP50284 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LtbrP50284 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms