Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brca1P48754 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.29□□□□□ -0.28
Brca1P48754 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC13.28□□□□□ -0.28
Brca1P48754 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.28□□□□□ -0.28
Brca1P48754 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.28□□□□□ -0.28
Brca1P48754 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Brca1P48754 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Brca1P48754 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Brca1P48754 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Gm23612-201ENSMUST00000103823 110 ntBASIC13.28□□□□□ -0.28
Brca1P48754 Gm11957-201ENSMUST00000118304 779 ntBASIC13.28□□□□□ -0.28
Brca1P48754 Gm13204-201ENSMUST00000120110 821 ntBASIC13.28□□□□□ -0.28
Brca1P48754 Mir1905-201ENSMUST00000122779 82 ntBASIC13.28□□□□□ -0.28
Brca1P48754 Gm26272-201ENSMUST00000179241 132 ntBASIC13.28□□□□□ -0.28
Brca1P48754 Gm23694-201ENSMUST00000179335 110 ntBASIC13.28□□□□□ -0.28
Brca1P48754 Gm23576-201ENSMUST00000179918 110 ntBASIC13.28□□□□□ -0.28
Brca1P48754 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.28□□□□□ -0.28
Brca1P48754 Gm6644-201ENSMUST00000186507 951 ntBASIC13.28□□□□□ -0.28
Brca1P48754 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.28□□□□□ -0.28
Brca1P48754 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.28□□□□□ -0.28
Brca1P48754 Lect2-202ENSMUST00000225183 823 ntBASIC13.28□□□□□ -0.28
Brca1P48754 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.28□□□□□ -0.28
Brca1P48754 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.28□□□□□ -0.28
Brca1P48754 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.28□□□□□ -0.28
Brca1P48754 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Brca1P48754 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brca1P48754 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Brca1P48754 Gm14071-201ENSMUST00000117817 509 ntBASIC13.27□□□□□ -0.28
Brca1P48754 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13.27□□□□□ -0.28
Brca1P48754 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.27□□□□□ -0.28
Brca1P48754 Gm26047-201ENSMUST00000157308 113 ntBASIC13.27□□□□□ -0.28
Brca1P48754 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Brca1P48754 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.27□□□□□ -0.28
Brca1P48754 Gm11942-201ENSMUST00000180255 345 ntBASIC13.27□□□□□ -0.28
Brca1P48754 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Brca1P48754 Gm26047-202ENSMUST00000198840 115 ntBASIC13.27□□□□□ -0.28
Brca1P48754 Gm2448-201ENSMUST00000207080 559 ntBASIC13.27□□□□□ -0.28
Brca1P48754 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Brca1P48754 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Brca1P48754 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Brca1P48754 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.27□□□□□ -0.28
Brca1P48754 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Brca1P48754 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Brca1P48754 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Brca1P48754 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.27□□□□□ -0.29
Brca1P48754 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Brca1P48754 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Gm25554-201ENSMUST00000158075 113 ntBASIC13.27□□□□□ -0.29
Brca1P48754 Gm26976-201ENSMUST00000182929 908 ntBASIC13.27□□□□□ -0.29
Brca1P48754 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.27□□□□□ -0.29
Brca1P48754 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC13.27□□□□□ -0.29
Brca1P48754 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.27□□□□□ -0.29
Brca1P48754 AC162932.1-201ENSMUST00000219209 872 ntBASIC13.27□□□□□ -0.29
Brca1P48754 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Brca1P48754 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Brca1P48754 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Brca1P48754 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Brca1P48754 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms