Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox6P40645 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox6P40645 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Sox6P40645 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox6P40645 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox6P40645 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.32□□□□□ -0.6
Sox6P40645 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.32□□□□□ -0.6
Sox6P40645 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Sox6P40645 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Sox6P40645 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Gm13392-201ENSMUST00000117708 150 ntBASIC11.32□□□□□ -0.6
Sox6P40645 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Gm16296-201ENSMUST00000159905 325 ntBASIC11.32□□□□□ -0.6
Sox6P40645 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox6P40645 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox6P40645 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Sox6P40645 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.32□□□□□ -0.6
Sox6P40645 Gm6013-201ENSMUST00000212264 699 ntBASIC11.32□□□□□ -0.6
Sox6P40645 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Sox6P40645 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox6P40645 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Sox6P40645 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.32□□□□□ -0.6
Sox6P40645 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox6P40645 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sox6P40645 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox6P40645 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox6P40645 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.32□□□□□ -0.6
Sox6P40645 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox6P40645 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.31□□□□□ -0.6
Sox6P40645 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sox6P40645 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sox6P40645 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.31□□□□□ -0.6
Sox6P40645 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox6P40645 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox6P40645 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox6P40645 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox6P40645 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox6P40645 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox6P40645 Gm22058-201ENSMUST00000083393 310 ntBASIC11.31□□□□□ -0.6
Sox6P40645 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox6P40645 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox6P40645 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Sox6P40645 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sox6P40645 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Sox6P40645 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.31□□□□□ -0.6
Sox6P40645 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox6P40645 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.3□□□□□ -0.6
Sox6P40645 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms