Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm11578-201ENSMUST00000118530 459 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm13019-201ENSMUST00000120000 276 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm12712-201ENSMUST00000120676 801 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm11244-201ENSMUST00000121243 237 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm12453-201ENSMUST00000121981 331 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm26047-201ENSMUST00000157308 113 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm28833-201ENSMUST00000189671 559 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm26047-202ENSMUST00000198840 115 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm6450-201ENSMUST00000200896 574 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm5340-201ENSMUST00000203733 880 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cxcl12P40224 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cxcl12P40224 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Cxcl12P40224 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cxcl12P40224 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cxcl12P40224 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.34□□□□□ -0.43
Cxcl12P40224 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.34□□□□□ -0.43
Cxcl12P40224 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cxcl12P40224 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.34□□□□□ -0.43
Cxcl12P40224 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.34□□□□□ -0.43
Cxcl12P40224 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.34□□□□□ -0.43
Cxcl12P40224 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.34□□□□□ -0.43
Cxcl12P40224 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.34□□□□□ -0.43
Cxcl12P40224 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.34□□□□□ -0.43
Cxcl12P40224 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.34□□□□□ -0.43
Cxcl12P40224 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.34□□□□□ -0.43
Cxcl12P40224 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.34□□□□□ -0.43
Cxcl12P40224 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.34□□□□□ -0.43
Cxcl12P40224 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcl12P40224 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cxcl12P40224 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.33□□□□□ -0.44
Cxcl12P40224 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cxcl12P40224 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcl12P40224 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms