Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.12□□□□□ -0.47
Fen1P39749 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Fen1P39749 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Fen1P39749 Gm6007-201ENSMUST00000208170 823 ntBASIC12.12□□□□□ -0.47
Fen1P39749 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.12□□□□□ -0.47
Fen1P39749 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Fen1P39749 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Fen1P39749 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Fen1P39749 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.12□□□□□ -0.47
Fen1P39749 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Fen1P39749 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Rgr-203ENSMUST00000225070 4704 ntBASIC12.11□□□□□ -0.47
Fen1P39749 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.11□□□□□ -0.47
Fen1P39749 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Fen1P39749 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.11□□□□□ -0.47
Fen1P39749 Gm11597-201ENSMUST00000121423 964 ntBASIC12.11□□□□□ -0.47
Fen1P39749 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.11□□□□□ -0.47
Fen1P39749 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Gm27331-201ENSMUST00000183705 60 ntBASIC12.11□□□□□ -0.47
Fen1P39749 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.11□□□□□ -0.47
Fen1P39749 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Fen1P39749 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Fen1P39749 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Fen1P39749 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.11□□□□□ -0.47
Fen1P39749 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fen1P39749 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.1□□□□□ -0.47
Fen1P39749 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Fen1P39749 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Fen1P39749 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Fen1P39749 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Fen1P39749 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Gm12390-201ENSMUST00000117897 397 ntBASIC12.1□□□□□ -0.47
Fen1P39749 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.1□□□□□ -0.47
Fen1P39749 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Fen1P39749 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.1□□□□□ -0.47
Fen1P39749 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.1□□□□□ -0.47
Fen1P39749 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.1□□□□□ -0.47
Fen1P39749 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms