Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC15.55■□□□□ 0.08
Col18a1P39061 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Col18a1P39061 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC15.55■□□□□ 0.08
Col18a1P39061 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC15.55■□□□□ 0.08
Col18a1P39061 CT025618.1-203ENSMUST00000227008 589 ntBASIC15.55■□□□□ 0.08
Col18a1P39061 AC158986.2-201ENSMUST00000227487 618 ntBASIC15.55■□□□□ 0.08
Col18a1P39061 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.55■□□□□ 0.08
Col18a1P39061 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Gm44740-201ENSMUST00000205603 1614 ntBASIC15.55■□□□□ 0.08
Col18a1P39061 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.55■□□□□ 0.08
Col18a1P39061 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col18a1P39061 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.55■□□□□ 0.08
Col18a1P39061 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Gm23132-201ENSMUST00000104254 132 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col18a1P39061 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.54■□□□□ 0.08
Col18a1P39061 Gm26119-201ENSMUST00000175601 104 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Col18a1P39061 Gm5976-201ENSMUST00000180794 996 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC15.54■□□□□ 0.08
Col18a1P39061 Gm30055-201ENSMUST00000203175 803 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC15.54■□□□□ 0.08
Col18a1P39061 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Gm5171-201ENSMUST00000214944 1415 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Col18a1P39061 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col18a1P39061 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Col18a1P39061 Mir1941-201ENSMUST00000157834 83 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Col18a1P39061 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC15.54■□□□□ 0.08
Col18a1P39061 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC15.54■□□□□ 0.08
Col18a1P39061 Gm18014-201ENSMUST00000183369 817 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC15.54■□□□□ 0.08
Col18a1P39061 AC124613.1-201ENSMUST00000198711 88 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Wbp1-209ENSMUST00000205023 716 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Gm44605-201ENSMUST00000206892 949 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC15.54■□□□□ 0.08
Col18a1P39061 AC122024.3-201ENSMUST00000217719 294 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 AC164429.1-201ENSMUST00000224210 518 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Col18a1P39061 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Col18a1P39061 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col18a1P39061 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC15.54■□□□□ 0.08
Col18a1P39061 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.53■□□□□ 0.08
Col18a1P39061 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col18a1P39061 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Gm12345-201ENSMUST00000119288 898 ntBASIC15.53■□□□□ 0.08
Col18a1P39061 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Gm7211-201ENSMUST00000172692 1118 ntBASIC15.53■□□□□ 0.08
Col18a1P39061 Gm7445-201ENSMUST00000192115 340 ntBASIC15.53■□□□□ 0.08
Col18a1P39061 Gm38314-201ENSMUST00000195709 625 ntBASIC15.53■□□□□ 0.08
Col18a1P39061 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Col18a1P39061 AC122891.1-201ENSMUST00000218671 268 ntBASIC15.53■□□□□ 0.08
Col18a1P39061 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Gm10581-201ENSMUST00000097986 231 ntBASIC15.53■□□□□ 0.08
Col18a1P39061 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col18a1P39061 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC15.53■□□□□ 0.08
Col18a1P39061 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col18a1P39061 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms