Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Gm27320-201ENSMUST00000184892 109 ntBASIC12.63□□□□□ -0.39
Usp4P35123 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Gm37489-201ENSMUST00000191883 159 ntBASIC12.63□□□□□ -0.39
Usp4P35123 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.63□□□□□ -0.39
Usp4P35123 Gm38241-201ENSMUST00000192641 898 ntBASIC12.63□□□□□ -0.39
Usp4P35123 Gm4857-201ENSMUST00000192718 785 ntBASIC12.63□□□□□ -0.39
Usp4P35123 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Gm4768-201ENSMUST00000206199 686 ntBASIC12.63□□□□□ -0.39
Usp4P35123 Gm10608-202ENSMUST00000213924 676 ntBASIC12.63□□□□□ -0.39
Usp4P35123 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Usp4P35123 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp4P35123 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Usp4P35123 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.62□□□□□ -0.39
Usp4P35123 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Usp4P35123 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Usp4P35123 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp4P35123 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp4P35123 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.62□□□□□ -0.39
Usp4P35123 Gm15236-201ENSMUST00000117309 379 ntBASIC12.62□□□□□ -0.39
Usp4P35123 Gm13315-201ENSMUST00000120376 991 ntBASIC12.62□□□□□ -0.39
Usp4P35123 Gm14381-201ENSMUST00000122105 414 ntBASIC12.62□□□□□ -0.39
Usp4P35123 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp4P35123 Gm25261-201ENSMUST00000157416 134 ntBASIC12.62□□□□□ -0.39
Usp4P35123 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.62□□□□□ -0.39
Usp4P35123 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.62□□□□□ -0.39
Usp4P35123 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.62□□□□□ -0.39
Usp4P35123 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp4P35123 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.62□□□□□ -0.39
Usp4P35123 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp4P35123 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp4P35123 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp4P35123 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.62□□□□□ -0.39
Usp4P35123 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Usp4P35123 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.62□□□□□ -0.39
Usp4P35123 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp4P35123 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.61□□□□□ -0.39
Usp4P35123 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.61□□□□□ -0.39
Usp4P35123 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.61□□□□□ -0.39
Usp4P35123 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp4P35123 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.61□□□□□ -0.39
Usp4P35123 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp4P35123 Mir877-201ENSMUST00000104738 85 ntBASIC12.61□□□□□ -0.39
Usp4P35123 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Usp4P35123 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 Gm16570-201ENSMUST00000161951 436 ntBASIC12.61□□□□□ -0.39
Usp4P35123 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.61□□□□□ -0.39
Usp4P35123 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp4P35123 Gm6334-201ENSMUST00000207083 228 ntBASIC12.61□□□□□ -0.39
Usp4P35123 Gm18056-201ENSMUST00000207670 568 ntBASIC12.61□□□□□ -0.39
Usp4P35123 Gm18061-201ENSMUST00000208350 562 ntBASIC12.61□□□□□ -0.39
Usp4P35123 Gm18063-201ENSMUST00000208529 568 ntBASIC12.61□□□□□ -0.39
Usp4P35123 Gm18052-201ENSMUST00000208750 559 ntBASIC12.61□□□□□ -0.39
Usp4P35123 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp4P35123 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp4P35123 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Usp4P35123 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp4P35123 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms