Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Mmp13P33435 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Mmp13P33435 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Gm12314-201ENSMUST00000118104 538 ntBASIC12.33□□□□□ -0.44
Mmp13P33435 Gm14381-201ENSMUST00000122105 414 ntBASIC12.33□□□□□ -0.44
Mmp13P33435 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Mmp13P33435 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.33□□□□□ -0.44
Mmp13P33435 Gm44958-201ENSMUST00000203734 736 ntBASIC12.33□□□□□ -0.44
Mmp13P33435 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.33□□□□□ -0.44
Mmp13P33435 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.33□□□□□ -0.44
Mmp13P33435 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.33□□□□□ -0.44
Mmp13P33435 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Mmp13P33435 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Mmp13P33435 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Mmp13P33435 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp13P33435 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.32□□□□□ -0.44
Mmp13P33435 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Mmp13P33435 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Mmp13P33435 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Mmp13P33435 Gm13350-201ENSMUST00000120519 479 ntBASIC12.32□□□□□ -0.44
Mmp13P33435 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Mmp13P33435 Gm2546-201ENSMUST00000182630 991 ntBASIC12.32□□□□□ -0.44
Mmp13P33435 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.32□□□□□ -0.44
Mmp13P33435 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.32□□□□□ -0.44
Mmp13P33435 Gm43758-201ENSMUST00000199500 367 ntBASIC12.32□□□□□ -0.44
Mmp13P33435 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.32□□□□□ -0.44
Mmp13P33435 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Mmp13P33435 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Mmp13P33435 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Mmp13P33435 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Mmp13P33435 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Mmp13P33435 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Mmp13P33435 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Mmp13P33435 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.32□□□□□ -0.44
Mmp13P33435 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp13P33435 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.32□□□□□ -0.44
Mmp13P33435 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp13P33435 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp13P33435 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp13P33435 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.31□□□□□ -0.44
Mmp13P33435 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp13P33435 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp13P33435 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp13P33435 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Mmp13P33435 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp13P33435 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.31□□□□□ -0.44
Mmp13P33435 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.31□□□□□ -0.44
Mmp13P33435 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Mmp13P33435 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp13P33435 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp13P33435 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Mmp13P33435 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Mmp13P33435 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Mmp13P33435 Gm24830-201ENSMUST00000102024 166 ntBASIC12.31□□□□□ -0.44
Mmp13P33435 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp13P33435 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Mmp13P33435 Gm11222-201ENSMUST00000119005 738 ntBASIC12.31□□□□□ -0.44
Mmp13P33435 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.31□□□□□ -0.44
Mmp13P33435 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Mmp13P33435 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.31□□□□□ -0.44
Mmp13P33435 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp13P33435 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.31□□□□□ -0.44
Mmp13P33435 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.31□□□□□ -0.44
Mmp13P33435 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms