Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxc11P31313 Mir3547-201ENSMUST00000175461 88 ntBASIC11.72□□□□□ -0.53
Hoxc11P31313 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.72□□□□□ -0.53
Hoxc11P31313 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxc11P31313 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hoxc11P31313 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxc11P31313 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxc11P31313 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.71□□□□□ -0.53
Hoxc11P31313 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxc11P31313 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Hoxc11P31313 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.71□□□□□ -0.53
Hoxc11P31313 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxc11P31313 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxc11P31313 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.71□□□□□ -0.53
Hoxc11P31313 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.71□□□□□ -0.53
Hoxc11P31313 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.71□□□□□ -0.53
Hoxc11P31313 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.71□□□□□ -0.53
Hoxc11P31313 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.71□□□□□ -0.53
Hoxc11P31313 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxc11P31313 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxc11P31313 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc11P31313 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc11P31313 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Hoxc11P31313 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc11P31313 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.71□□□□□ -0.54
Hoxc11P31313 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc11P31313 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc11P31313 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxc11P31313 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hoxc11P31313 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.7□□□□□ -0.54
Hoxc11P31313 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.7□□□□□ -0.54
Hoxc11P31313 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.7□□□□□ -0.54
Hoxc11P31313 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hoxc11P31313 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Gm11989-201ENSMUST00000117240 672 ntBASIC11.7□□□□□ -0.54
Hoxc11P31313 Gm11362-201ENSMUST00000118838 850 ntBASIC11.7□□□□□ -0.54
Hoxc11P31313 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hoxc11P31313 Gm18734-201ENSMUST00000172937 808 ntBASIC11.7□□□□□ -0.54
Hoxc11P31313 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Hoxc11P31313 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.7□□□□□ -0.54
Hoxc11P31313 AU022133-201ENSMUST00000200601 873 ntBASIC11.7□□□□□ -0.54
Hoxc11P31313 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.7□□□□□ -0.54
Hoxc11P31313 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.7□□□□□ -0.54
Hoxc11P31313 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxc11P31313 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms