Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RxrbP28704 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.09□□□□□ -0.47
RxrbP28704 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.09□□□□□ -0.47
RxrbP28704 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RxrbP28704 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RxrbP28704 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.08□□□□□ -0.48
RxrbP28704 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.08□□□□□ -0.48
RxrbP28704 Gm7029-201ENSMUST00000173226 450 ntBASIC12.08□□□□□ -0.48
RxrbP28704 Gm27839-201ENSMUST00000184242 106 ntBASIC12.08□□□□□ -0.48
RxrbP28704 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.08□□□□□ -0.48
RxrbP28704 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.08□□□□□ -0.48
RxrbP28704 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RxrbP28704 Gm2594-201ENSMUST00000214774 742 ntBASIC12.08□□□□□ -0.48
RxrbP28704 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.08□□□□□ -0.48
RxrbP28704 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Gm10268-201ENSMUST00000085340 555 ntBASIC12.08□□□□□ -0.48
RxrbP28704 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
RxrbP28704 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.08□□□□□ -0.48
RxrbP28704 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.08□□□□□ -0.48
RxrbP28704 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
RxrbP28704 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
RxrbP28704 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrbP28704 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RxrbP28704 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
RxrbP28704 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
RxrbP28704 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RxrbP28704 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RxrbP28704 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
RxrbP28704 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.07□□□□□ -0.48
RxrbP28704 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.07□□□□□ -0.48
RxrbP28704 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.07□□□□□ -0.48
RxrbP28704 Gm43818-201ENSMUST00000200605 466 ntBASIC12.07□□□□□ -0.48
RxrbP28704 Gm6007-201ENSMUST00000208170 823 ntBASIC12.07□□□□□ -0.48
RxrbP28704 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.07□□□□□ -0.48
RxrbP28704 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.07□□□□□ -0.48
RxrbP28704 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.07□□□□□ -0.48
RxrbP28704 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RxrbP28704 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
RxrbP28704 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
RxrbP28704 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RxrbP28704 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.07□□□□□ -0.48
RxrbP28704 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.07□□□□□ -0.48
RxrbP28704 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrbP28704 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms