Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.04□□□□□ -0.8
Col8a2P25318 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.04□□□□□ -0.8
Col8a2P25318 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Gm5733-201ENSMUST00000190232 939 ntBASIC10.04□□□□□ -0.8
Col8a2P25318 Gm43138-201ENSMUST00000199123 708 ntBASIC10.04□□□□□ -0.8
Col8a2P25318 Gm18711-201ENSMUST00000199341 750 ntBASIC10.04□□□□□ -0.8
Col8a2P25318 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.04□□□□□ -0.8
Col8a2P25318 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Col8a2P25318 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Col8a2P25318 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Col8a2P25318 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Col8a2P25318 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Col8a2P25318 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Col8a2P25318 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Col8a2P25318 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Col8a2P25318 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Gm23596-201ENSMUST00000104304 132 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Gm23912-201ENSMUST00000104687 87 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Gm11331-201ENSMUST00000119764 288 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.03□□□□□ -0.8
Col8a2P25318 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.03□□□□□ -0.8
Col8a2P25318 Gm25881-201ENSMUST00000157783 103 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.03□□□□□ -0.8
Col8a2P25318 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.03□□□□□ -0.8
Col8a2P25318 Gm5706-201ENSMUST00000181525 993 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Gm3332-201ENSMUST00000189337 928 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Col8a2P25318 Gm19208-201ENSMUST00000213861 912 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.03□□□□□ -0.8
Col8a2P25318 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.03□□□□□ -0.8
Col8a2P25318 Gm807-202ENSMUST00000224929 408 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Col8a2P25318 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.03□□□□□ -0.8
Col8a2P25318 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Col8a2P25318 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col8a2P25318 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Col8a2P25318 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.03□□□□□ -0.8
Col8a2P25318 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms