Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.77□□□□□ -0.85
Cdx1P18111 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Cdx1P18111 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.77□□□□□ -0.85
Cdx1P18111 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Gm44745-201ENSMUST00000206563 2723 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Gm5187-201ENSMUST00000117317 991 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 Gm5687-201ENSMUST00000118252 640 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 Gm11803-201ENSMUST00000119966 444 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.76□□□□□ -0.85
Cdx1P18111 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Gm10156-201ENSMUST00000122364 462 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Cdx1P18111 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Cdx1P18111 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Cdx1P18111 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Cdx1P18111 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.76□□□□□ -0.85
Cdx1P18111 Gm38144-201ENSMUST00000192790 465 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Gm18934-201ENSMUST00000216671 1044 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC9.76□□□□□ -0.85
Cdx1P18111 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC9.76□□□□□ -0.85
Cdx1P18111 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Cdx1P18111 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Cdx1P18111 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Cdx1P18111 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Cdx1P18111 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.76□□□□□ -0.85
Cdx1P18111 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.76□□□□□ -0.85
Cdx1P18111 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Cdx1P18111 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.76□□□□□ -0.85
Cdx1P18111 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cdx1P18111 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.75□□□□□ -0.85
Cdx1P18111 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.75□□□□□ -0.85
Cdx1P18111 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Cdx1P18111 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Cdx1P18111 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.75□□□□□ -0.85
Cdx1P18111 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.75□□□□□ -0.85
Cdx1P18111 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.75□□□□□ -0.85
Cdx1P18111 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.75□□□□□ -0.85
Cdx1P18111 Gm16177-201ENSMUST00000120728 718 ntBASIC9.75□□□□□ -0.85
Cdx1P18111 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.75□□□□□ -0.85
Cdx1P18111 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Cdx1P18111 Gm27572-201ENSMUST00000183702 255 ntBASIC9.75□□□□□ -0.85
Cdx1P18111 Gm43179-201ENSMUST00000198797 275 ntBASIC9.75□□□□□ -0.85
Cdx1P18111 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Cdx1P18111 Gm6013-201ENSMUST00000212264 699 ntBASIC9.75□□□□□ -0.85
Cdx1P18111 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.75□□□□□ -0.85
Cdx1P18111 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC9.75□□□□□ -0.85
Cdx1P18111 Gm17330-201ENSMUST00000221047 165 ntBASIC9.75□□□□□ -0.85
Cdx1P18111 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms