Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.48□□□□□ -0.73
UbbP0CG49 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UbbP0CG49 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
UbbP0CG49 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
UbbP0CG49 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UbbP0CG49 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Btrc-209ENSMUST00000224478 2194 ntBASIC10.48□□□□□ -0.73
UbbP0CG49 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
UbbP0CG49 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UbbP0CG49 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.48□□□□□ -0.73
UbbP0CG49 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.48□□□□□ -0.73
UbbP0CG49 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.48□□□□□ -0.73
UbbP0CG49 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.48□□□□□ -0.73
UbbP0CG49 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.48□□□□□ -0.73
UbbP0CG49 Gm29649-201ENSMUST00000185649 419 ntBASIC10.48□□□□□ -0.73
UbbP0CG49 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.48□□□□□ -0.73
UbbP0CG49 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.48□□□□□ -0.73
UbbP0CG49 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Gm10076-201ENSMUST00000073238 384 ntBASIC10.48□□□□□ -0.73
UbbP0CG49 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Gm10268-201ENSMUST00000085340 555 ntBASIC10.48□□□□□ -0.73
UbbP0CG49 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
UbbP0CG49 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.48□□□□□ -0.73
UbbP0CG49 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.48□□□□□ -0.73
UbbP0CG49 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.48□□□□□ -0.73
UbbP0CG49 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.48□□□□□ -0.73
UbbP0CG49 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
UbbP0CG49 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
UbbP0CG49 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
UbbP0CG49 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
UbbP0CG49 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.47□□□□□ -0.73
UbbP0CG49 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.47□□□□□ -0.73
UbbP0CG49 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.47□□□□□ -0.73
UbbP0CG49 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
UbbP0CG49 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.47□□□□□ -0.73
UbbP0CG49 Gm12502-201ENSMUST00000120197 444 ntBASIC10.47□□□□□ -0.73
UbbP0CG49 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
UbbP0CG49 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
UbbP0CG49 Auts2-212ENSMUST00000178555 309 ntBASIC10.47□□□□□ -0.73
UbbP0CG49 Gm42693-201ENSMUST00000196779 631 ntBASIC10.47□□□□□ -0.73
UbbP0CG49 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.47□□□□□ -0.73
UbbP0CG49 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.47□□□□□ -0.73
UbbP0CG49 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
UbbP0CG49 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.47□□□□□ -0.73
UbbP0CG49 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.47□□□□□ -0.73
UbbP0CG49 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
UbbP0CG49 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.47□□□□□ -0.73
UbbP0CG49 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms