Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc8P09025 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxc8P09025 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc8P09025 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc8P09025 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc8P09025 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc8P09025 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc8P09025 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc8P09025 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc8P09025 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc8P09025 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc8P09025 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hoxc8P09025 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxc8P09025 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc8P09025 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc8P09025 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.73□□□□□ -0.37
Hoxc8P09025 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Gm23218-201ENSMUST00000158124 276 ntBASIC12.73□□□□□ -0.37
Hoxc8P09025 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.73□□□□□ -0.37
Hoxc8P09025 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Mir6407-201ENSMUST00000184510 101 ntBASIC12.73□□□□□ -0.37
Hoxc8P09025 Gm7593-201ENSMUST00000187246 644 ntBASIC12.73□□□□□ -0.37
Hoxc8P09025 Gm29410-201ENSMUST00000188383 694 ntBASIC12.73□□□□□ -0.37
Hoxc8P09025 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.73□□□□□ -0.37
Hoxc8P09025 Gm7504-201ENSMUST00000201449 424 ntBASIC12.73□□□□□ -0.37
Hoxc8P09025 Gm17825-201ENSMUST00000206836 794 ntBASIC12.73□□□□□ -0.37
Hoxc8P09025 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxc8P09025 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.73□□□□□ -0.37
Hoxc8P09025 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxc8P09025 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc8P09025 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc8P09025 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.72□□□□□ -0.37
Hoxc8P09025 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.72□□□□□ -0.37
Hoxc8P09025 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm14395-201ENSMUST00000120494 563 ntBASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc8P09025 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc8P09025 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.72□□□□□ -0.37
Hoxc8P09025 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hoxc8P09025 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxc8P09025 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc8P09025 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms