Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.38□□□□□ -0.59
ApoeP08226 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
ApoeP08226 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
ApoeP08226 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.38□□□□□ -0.59
ApoeP08226 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
ApoeP08226 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.38□□□□□ -0.59
ApoeP08226 Gm13736-201ENSMUST00000119272 253 ntBASIC11.38□□□□□ -0.59
ApoeP08226 Gm13342-201ENSMUST00000121055 207 ntBASIC11.38□□□□□ -0.59
ApoeP08226 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.38□□□□□ -0.59
ApoeP08226 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Gm26927-201ENSMUST00000182385 965 ntBASIC11.38□□□□□ -0.59
ApoeP08226 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.38□□□□□ -0.59
ApoeP08226 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Gm39404-201ENSMUST00000216350 313 ntBASIC11.38□□□□□ -0.59
ApoeP08226 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.38□□□□□ -0.59
ApoeP08226 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.38□□□□□ -0.59
ApoeP08226 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
ApoeP08226 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
ApoeP08226 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.38□□□□□ -0.59
ApoeP08226 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.38□□□□□ -0.59
ApoeP08226 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ApoeP08226 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.37□□□□□ -0.59
ApoeP08226 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
ApoeP08226 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Gm11439-201ENSMUST00000118598 409 ntBASIC11.37□□□□□ -0.59
ApoeP08226 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Mir1894-201ENSMUST00000122802 81 ntBASIC11.37□□□□□ -0.59
ApoeP08226 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.37□□□□□ -0.59
ApoeP08226 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
ApoeP08226 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.37□□□□□ -0.59
ApoeP08226 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.37□□□□□ -0.59
ApoeP08226 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.37□□□□□ -0.59
ApoeP08226 Gm42693-201ENSMUST00000196779 631 ntBASIC11.37□□□□□ -0.59
ApoeP08226 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.37□□□□□ -0.59
ApoeP08226 Gm5904-201ENSMUST00000210286 865 ntBASIC11.37□□□□□ -0.59
ApoeP08226 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.37□□□□□ -0.59
ApoeP08226 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
ApoeP08226 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.37□□□□□ -0.59
ApoeP08226 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.37□□□□□ -0.59
ApoeP08226 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
ApoeP08226 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
ApoeP08226 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.37□□□□□ -0.59
ApoeP08226 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.37□□□□□ -0.59
ApoeP08226 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
ApoeP08226 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.37□□□□□ -0.59
ApoeP08226 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ApoeP08226 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms