Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TnfP06804 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.75□□□□□ -0.37
TnfP06804 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.75□□□□□ -0.37
TnfP06804 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TnfP06804 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Gm4310-201ENSMUST00000177847 889 ntBASIC12.75□□□□□ -0.37
TnfP06804 Gm5523-201ENSMUST00000180415 997 ntBASIC12.75□□□□□ -0.37
TnfP06804 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.75□□□□□ -0.37
TnfP06804 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TnfP06804 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.75□□□□□ -0.37
TnfP06804 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TnfP06804 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.75□□□□□ -0.37
TnfP06804 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TnfP06804 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.75□□□□□ -0.37
TnfP06804 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
TnfP06804 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TnfP06804 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TnfP06804 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TnfP06804 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TnfP06804 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TnfP06804 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.74□□□□□ -0.37
TnfP06804 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.74□□□□□ -0.37
TnfP06804 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Gm15207-201ENSMUST00000119259 442 ntBASIC12.74□□□□□ -0.37
TnfP06804 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
TnfP06804 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.74□□□□□ -0.37
TnfP06804 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
TnfP06804 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.74□□□□□ -0.37
TnfP06804 Gm10774-201ENSMUST00000188689 204 ntBASIC12.74□□□□□ -0.37
TnfP06804 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.74□□□□□ -0.37
TnfP06804 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
TnfP06804 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.74□□□□□ -0.37
TnfP06804 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.74□□□□□ -0.37
TnfP06804 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TnfP06804 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
TnfP06804 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TnfP06804 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.74□□□□□ -0.37
TnfP06804 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TnfP06804 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
TnfP06804 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.73□□□□□ -0.37
TnfP06804 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.73□□□□□ -0.37
TnfP06804 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.73□□□□□ -0.37
TnfP06804 Gm9550-201ENSMUST00000161130 862 ntBASIC12.73□□□□□ -0.37
TnfP06804 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.73□□□□□ -0.37
TnfP06804 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.73□□□□□ -0.37
TnfP06804 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.73□□□□□ -0.37
TnfP06804 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.73□□□□□ -0.37
TnfP06804 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.73□□□□□ -0.37
TnfP06804 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TnfP06804 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TnfP06804 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TnfP06804 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms