Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.75□□□□□ -0.69
P06344 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
P06344 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.74□□□□□ -0.69
P06344 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.74□□□□□ -0.69
P06344 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
P06344 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.74□□□□□ -0.69
P06344 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.74□□□□□ -0.69
P06344 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.74□□□□□ -0.69
P06344 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Gm22133-201ENSMUST00000102082 109 ntBASIC10.74□□□□□ -0.69
P06344 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.74□□□□□ -0.69
P06344 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Gm12380-201ENSMUST00000119012 544 ntBASIC10.74□□□□□ -0.69
P06344 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.74□□□□□ -0.69
P06344 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.74□□□□□ -0.69
P06344 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.74□□□□□ -0.69
P06344 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.74□□□□□ -0.69
P06344 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.74□□□□□ -0.69
P06344 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
P06344 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
P06344 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
P06344 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
P06344 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
P06344 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.73□□□□□ -0.69
P06344 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
P06344 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
P06344 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
P06344 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.73□□□□□ -0.69
P06344 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Gm23200-201ENSMUST00000104379 132 ntBASIC10.73□□□□□ -0.69
P06344 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
P06344 Gm4909-201ENSMUST00000118749 794 ntBASIC10.73□□□□□ -0.69
P06344 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.73□□□□□ -0.69
P06344 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
P06344 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.73□□□□□ -0.69
P06344 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.73□□□□□ -0.69
P06344 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.73□□□□□ -0.69
P06344 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Gm5455-201ENSMUST00000058710 715 ntBASIC10.73□□□□□ -0.69
P06344 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.73□□□□□ -0.69
P06344 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
P06344 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.73□□□□□ -0.69
P06344 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
P06344 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
P06344 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P06344 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.73□□□□□ -0.69
P06344 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms