Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Hcn1O88704 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Gm27023-201ENSMUST00000182372 285 ntBASIC11.56□□□□□ -0.56
Hcn1O88704 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.56□□□□□ -0.56
Hcn1O88704 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.56□□□□□ -0.56
Hcn1O88704 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.56□□□□□ -0.56
Hcn1O88704 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.56□□□□□ -0.56
Hcn1O88704 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.56□□□□□ -0.56
Hcn1O88704 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Hcn1O88704 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Hcn1O88704 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.55□□□□□ -0.56
Hcn1O88704 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hcn1O88704 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hcn1O88704 Gm22323-201ENSMUST00000103832 109 ntBASIC11.55□□□□□ -0.56
Hcn1O88704 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Gm14726-201ENSMUST00000120623 896 ntBASIC11.55□□□□□ -0.56
Hcn1O88704 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.55□□□□□ -0.56
Hcn1O88704 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hcn1O88704 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.55□□□□□ -0.56
Hcn1O88704 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hcn1O88704 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hcn1O88704 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hcn1O88704 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.55□□□□□ -0.56
Hcn1O88704 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.55□□□□□ -0.56
Hcn1O88704 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.55□□□□□ -0.56
Hcn1O88704 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hcn1O88704 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.54□□□□□ -0.56
Hcn1O88704 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.54□□□□□ -0.56
Hcn1O88704 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Hcn1O88704 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.54□□□□□ -0.56
Hcn1O88704 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Gm20482-202ENSMUST00000174729 825 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 Gm31256-201ENSMUST00000194705 506 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.54□□□□□ -0.56
Hcn1O88704 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.54□□□□□ -0.56
Hcn1O88704 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.54□□□□□ -0.56
Hcn1O88704 Gm39404-201ENSMUST00000216350 313 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hcn1O88704 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Hcn1O88704 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Hcn1O88704 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Hcn1O88704 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.54□□□□□ -0.56
Hcn1O88704 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms