Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.86□□□□□ -0.51
ClppO88696 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ClppO88696 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Gm32999-201ENSMUST00000192693 562 ntBASIC11.86□□□□□ -0.51
ClppO88696 Gm19187-201ENSMUST00000206781 892 ntBASIC11.86□□□□□ -0.51
ClppO88696 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.86□□□□□ -0.51
ClppO88696 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ClppO88696 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ClppO88696 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ClppO88696 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.86□□□□□ -0.51
ClppO88696 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClppO88696 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ClppO88696 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
ClppO88696 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.85□□□□□ -0.51
ClppO88696 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ClppO88696 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.85□□□□□ -0.51
ClppO88696 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Gm13315-201ENSMUST00000120376 991 ntBASIC11.85□□□□□ -0.51
ClppO88696 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.85□□□□□ -0.51
ClppO88696 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.85□□□□□ -0.51
ClppO88696 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ClppO88696 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Gm27341-201ENSMUST00000183570 106 ntBASIC11.85□□□□□ -0.51
ClppO88696 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.85□□□□□ -0.51
ClppO88696 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
ClppO88696 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.85□□□□□ -0.51
ClppO88696 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ClppO88696 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ClppO88696 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ClppO88696 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ClppO88696 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClppO88696 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
ClppO88696 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.84□□□□□ -0.51
ClppO88696 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ClppO88696 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.84□□□□□ -0.51
ClppO88696 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ClppO88696 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.84□□□□□ -0.51
ClppO88696 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.84□□□□□ -0.51
ClppO88696 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.84□□□□□ -0.51
ClppO88696 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ClppO88696 Gm6963-201ENSMUST00000147879 379 ntBASIC11.84□□□□□ -0.51
ClppO88696 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.84□□□□□ -0.51
ClppO88696 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms