Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.11□□□□□ -0.63
Cops4O88544 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cops4O88544 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cops4O88544 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.1□□□□□ -0.63
Cops4O88544 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cops4O88544 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.1□□□□□ -0.63
Cops4O88544 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.1□□□□□ -0.63
Cops4O88544 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Snord83b-201ENSMUST00000104546 94 ntBASIC11.1□□□□□ -0.63
Cops4O88544 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Gm4271-201ENSMUST00000174444 973 ntBASIC11.1□□□□□ -0.63
Cops4O88544 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cops4O88544 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.1□□□□□ -0.63
Cops4O88544 Gm27331-201ENSMUST00000183705 60 ntBASIC11.1□□□□□ -0.63
Cops4O88544 Gm27243-201ENSMUST00000183964 521 ntBASIC11.1□□□□□ -0.63
Cops4O88544 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.1□□□□□ -0.63
Cops4O88544 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cops4O88544 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.1□□□□□ -0.63
Cops4O88544 Gm19163-201ENSMUST00000223313 780 ntBASIC11.1□□□□□ -0.63
Cops4O88544 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.1□□□□□ -0.63
Cops4O88544 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cops4O88544 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cops4O88544 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Rgr-203ENSMUST00000225070 4704 ntBASIC11.1□□□□□ -0.63
Cops4O88544 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cops4O88544 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.09□□□□□ -0.63
Cops4O88544 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.09□□□□□ -0.63
Cops4O88544 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.09□□□□□ -0.63
Cops4O88544 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cops4O88544 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cops4O88544 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.09□□□□□ -0.63
Cops4O88544 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.09□□□□□ -0.63
Cops4O88544 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cops4O88544 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.09□□□□□ -0.63
Cops4O88544 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.09□□□□□ -0.63
Cops4O88544 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.09□□□□□ -0.63
Cops4O88544 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.09□□□□□ -0.63
Cops4O88544 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.09□□□□□ -0.63
Cops4O88544 Gm4768-201ENSMUST00000206199 686 ntBASIC11.09□□□□□ -0.63
Cops4O88544 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cops4O88544 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cops4O88544 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.09□□□□□ -0.63
Cops4O88544 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms