Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pdlim1O70400 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.94□□□□□ -0.5
Pdlim1O70400 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Pdlim1O70400 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pdlim1O70400 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim1O70400 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim1O70400 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pdlim1O70400 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Pdlim1O70400 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pdlim1O70400 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pdlim1O70400 Gm44262-201ENSMUST00000204969 372 ntBASIC11.93□□□□□ -0.5
Pdlim1O70400 Gm17931-201ENSMUST00000208132 634 ntBASIC11.93□□□□□ -0.5
Pdlim1O70400 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pdlim1O70400 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.93□□□□□ -0.5
Pdlim1O70400 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pdlim1O70400 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.93□□□□□ -0.5
Pdlim1O70400 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pdlim1O70400 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.93□□□□□ -0.5
Pdlim1O70400 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pdlim1O70400 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.93□□□□□ -0.5
Pdlim1O70400 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim1O70400 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.93□□□□□ -0.5
Pdlim1O70400 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.93□□□□□ -0.5
Pdlim1O70400 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.92□□□□□ -0.5
Pdlim1O70400 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.92□□□□□ -0.5
Pdlim1O70400 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Gm45186-201ENSMUST00000206874 478 ntBASIC11.92□□□□□ -0.5
Pdlim1O70400 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.92□□□□□ -0.5
Pdlim1O70400 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.92□□□□□ -0.5
Pdlim1O70400 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.92□□□□□ -0.5
Pdlim1O70400 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.92□□□□□ -0.5
Pdlim1O70400 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim1O70400 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.91□□□□□ -0.5
Pdlim1O70400 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pdlim1O70400 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms