Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.52□□□□□ -0.89
Efnb3O35393 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Efnb3O35393 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Efnb3O35393 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.51□□□□□ -0.89
Efnb3O35393 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.51□□□□□ -0.89
Efnb3O35393 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.51□□□□□ -0.89
Efnb3O35393 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.51□□□□□ -0.89
Efnb3O35393 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Efnb3O35393 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.51□□□□□ -0.89
Efnb3O35393 Gm22331-201ENSMUST00000158066 136 ntBASIC9.51□□□□□ -0.89
Efnb3O35393 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm8018-201ENSMUST00000173536 789 ntBASIC9.51□□□□□ -0.89
Efnb3O35393 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.51□□□□□ -0.89
Efnb3O35393 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC9.51□□□□□ -0.89
Efnb3O35393 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm6091-201ENSMUST00000098307 165 ntBASIC9.51□□□□□ -0.89
Efnb3O35393 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.51□□□□□ -0.89
Efnb3O35393 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Efnb3O35393 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.51□□□□□ -0.89
Efnb3O35393 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.51□□□□□ -0.89
Efnb3O35393 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Efnb3O35393 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.51□□□□□ -0.89
Efnb3O35393 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Efnb3O35393 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Efnb3O35393 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.5□□□□□ -0.89
Efnb3O35393 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.5□□□□□ -0.89
Efnb3O35393 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.5□□□□□ -0.89
Efnb3O35393 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.5□□□□□ -0.89
Efnb3O35393 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Efnb3O35393 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Efnb3O35393 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Gm24830-201ENSMUST00000102024 166 ntBASIC9.5□□□□□ -0.89
Efnb3O35393 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Efnb3O35393 Gm14127-201ENSMUST00000117906 678 ntBASIC9.5□□□□□ -0.89
Efnb3O35393 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.5□□□□□ -0.89
Efnb3O35393 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Efnb3O35393 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Efnb3O35393 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.5□□□□□ -0.89
Efnb3O35393 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms