Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Polr1aO35134 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Gm7841-201ENSMUST00000122108 1629 ntBASIC18.17■□□□□ 0.5
Polr1aO35134 Gm38577-201ENSMUST00000221531 4545 ntBASIC18.17■□□□□ 0.5
Polr1aO35134 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC18.17■□□□□ 0.5
Polr1aO35134 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Mir671-201ENSMUST00000102432 98 ntBASIC18.17■□□□□ 0.5
Polr1aO35134 Gm12663-201ENSMUST00000118481 958 ntBASIC18.17■□□□□ 0.5
Polr1aO35134 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Polr1aO35134 Mir1905-201ENSMUST00000122779 82 ntBASIC18.17■□□□□ 0.5
Polr1aO35134 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC18.17■□□□□ 0.5
Polr1aO35134 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC18.17■□□□□ 0.5
Polr1aO35134 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC18.17■□□□□ 0.5
Polr1aO35134 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 AC153962.2-201ENSMUST00000219417 550 ntBASIC18.17■□□□□ 0.5
Polr1aO35134 AC154305.2-201ENSMUST00000225813 901 ntBASIC18.17■□□□□ 0.5
Polr1aO35134 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Polr1aO35134 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Polr1aO35134 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Polr1aO35134 Gm37391-201ENSMUST00000194891 2318 ntBASIC18.16■□□□□ 0.5
Polr1aO35134 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Polr1aO35134 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Rnf17-202ENSMUST00000223627 2077 ntBASIC18.16■□□□□ 0.5
Polr1aO35134 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC18.16■□□□□ 0.5
Polr1aO35134 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC18.16■□□□□ 0.5
Polr1aO35134 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC18.16■□□□□ 0.5
Polr1aO35134 Gm24992-201ENSMUST00000157412 130 ntBASIC18.16■□□□□ 0.5
Polr1aO35134 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Gm18204-201ENSMUST00000209835 793 ntBASIC18.16■□□□□ 0.5
Polr1aO35134 Mt1-202ENSMUST00000211807 1085 ntBASIC18.16■□□□□ 0.5
Polr1aO35134 CT030170.2-201ENSMUST00000223267 126 ntBASIC18.16■□□□□ 0.5
Polr1aO35134 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
Polr1aO35134 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Polr1aO35134 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Polr1aO35134 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr1aO35134 Gm37600-201ENSMUST00000193764 3292 ntBASIC18.15■□□□□ 0.5
Polr1aO35134 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Gm25148-201ENSMUST00000104611 123 ntBASIC18.15■□□□□ 0.5
Polr1aO35134 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Polr1aO35134 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC18.15■□□□□ 0.5
Polr1aO35134 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Gm26976-201ENSMUST00000182929 908 ntBASIC18.15■□□□□ 0.5
Polr1aO35134 Gm44647-201ENSMUST00000207402 428 ntBASIC18.15■□□□□ 0.5
Polr1aO35134 Gm5599-201ENSMUST00000209602 788 ntBASIC18.15■□□□□ 0.5
Polr1aO35134 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC18.15■□□□□ 0.5
Polr1aO35134 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC18.15■□□□□ 0.5
Polr1aO35134 AC154589.2-201ENSMUST00000228847 251 ntBASIC18.15■□□□□ 0.5
Polr1aO35134 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Polr1aO35134 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Polr1aO35134 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Polr1aO35134 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Polr1aO35134 Gm12389-201ENSMUST00000117696 418 ntBASIC18.15■□□□□ 0.5
Polr1aO35134 Gm11502-201ENSMUST00000120917 1211 ntBASIC18.15■□□□□ 0.5
Polr1aO35134 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC18.15■□□□□ 0.5
Polr1aO35134 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC18.15■□□□□ 0.5
Polr1aO35134 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Polr1aO35134 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms