Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NpcdF8VQB8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm11836-201ENSMUST00000121022 441 ntBASIC14.52□□□□□ -0.09
NpcdF8VQB8 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm43752-201ENSMUST00000198475 697 ntBASIC14.52□□□□□ -0.09
NpcdF8VQB8 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm8956-201ENSMUST00000203939 825 ntBASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NpcdF8VQB8 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm4604-201ENSMUST00000025040 390 ntBASIC14.52□□□□□ -0.09
NpcdF8VQB8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
NpcdF8VQB8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.52□□□□□ -0.09
NpcdF8VQB8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.52□□□□□ -0.09
NpcdF8VQB8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.52□□□□□ -0.09
NpcdF8VQB8 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NpcdF8VQB8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.51□□□□□ -0.09
NpcdF8VQB8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.51□□□□□ -0.09
NpcdF8VQB8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
NpcdF8VQB8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NpcdF8VQB8 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.51□□□□□ -0.09
NpcdF8VQB8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NpcdF8VQB8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Gm25076-201ENSMUST00000104098 132 ntBASIC14.5□□□□□ -0.09
NpcdF8VQB8 Gm5909-201ENSMUST00000119768 1281 ntBASIC14.5□□□□□ -0.09
NpcdF8VQB8 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Gm9135-201ENSMUST00000182963 990 ntBASIC14.5□□□□□ -0.09
NpcdF8VQB8 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.5□□□□□ -0.09
NpcdF8VQB8 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.5□□□□□ -0.09
NpcdF8VQB8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NpcdF8VQB8 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NpcdF8VQB8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms