Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6F6VAN0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Atf6F6VAN0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.38□□□□□ -0.43
Atf6F6VAN0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6F6VAN0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6F6VAN0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6F6VAN0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6F6VAN0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Atf6F6VAN0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm14726-201ENSMUST00000120623 896 ntBASIC12.37□□□□□ -0.43
Atf6F6VAN0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm3096-201ENSMUST00000185770 364 ntBASIC12.37□□□□□ -0.43
Atf6F6VAN0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm38266-201ENSMUST00000194931 421 ntBASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm45865-201ENSMUST00000211815 945 ntBASIC12.37□□□□□ -0.43
Atf6F6VAN0 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.37□□□□□ -0.43
Atf6F6VAN0 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.37□□□□□ -0.43
Atf6F6VAN0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.37□□□□□ -0.43
Atf6F6VAN0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.37□□□□□ -0.43
Atf6F6VAN0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atf6F6VAN0 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.37□□□□□ -0.43
Atf6F6VAN0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.36□□□□□ -0.43
Atf6F6VAN0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Atf6F6VAN0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Gm12036-201ENSMUST00000120008 530 ntBASIC12.36□□□□□ -0.43
Atf6F6VAN0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.36□□□□□ -0.43
Atf6F6VAN0 Gm7722-201ENSMUST00000120646 741 ntBASIC12.36□□□□□ -0.43
Atf6F6VAN0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Gm27046-201ENSMUST00000182160 463 ntBASIC12.36□□□□□ -0.43
Atf6F6VAN0 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.36□□□□□ -0.43
Atf6F6VAN0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.36□□□□□ -0.43
Atf6F6VAN0 Gm17931-201ENSMUST00000208132 634 ntBASIC12.36□□□□□ -0.43
Atf6F6VAN0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.36□□□□□ -0.43
Atf6F6VAN0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.36□□□□□ -0.43
Atf6F6VAN0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atf6F6VAN0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Atf6F6VAN0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.35□□□□□ -0.43
Atf6F6VAN0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.35□□□□□ -0.43
Atf6F6VAN0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms