Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh17E9PXF0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Gm11450-201ENSMUST00000121144 333 ntBASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Gm18038-201ENSMUST00000197900 485 ntBASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Gm17827-201ENSMUST00000211825 742 ntBASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh17E9PXF0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm9062-201ENSMUST00000117712 727 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm15515-201ENSMUST00000117827 822 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm23699-201ENSMUST00000158835 135 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm5523-201ENSMUST00000180415 997 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm5455-201ENSMUST00000058710 715 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Map1b-203ENSMUST00000223725 2669 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh17E9PXF0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms