Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim30bE9PVL6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim30bE9PVL6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim30bE9PVL6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim30bE9PVL6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim30bE9PVL6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim30bE9PVL6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim30bE9PVL6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim30bE9PVL6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Gm22920-201ENSMUST00000102175 109 ntBASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Gm14193-201ENSMUST00000105067 153 ntBASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Gm23771-201ENSMUST00000178702 110 ntBASIC12.81□□□□□ -0.36
Trim30bE9PVL6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Gm43186-201ENSMUST00000198130 824 ntBASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Gm7600-201ENSMUST00000209657 785 ntBASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30bE9PVL6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.81□□□□□ -0.36
Trim30bE9PVL6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm23045-201ENSMUST00000175041 96 ntBASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm27910-201ENSMUST00000185004 107 ntBASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.8□□□□□ -0.36
Trim30bE9PVL6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30bE9PVL6 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.79□□□□□ -0.36
Trim30bE9PVL6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30bE9PVL6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30bE9PVL6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim30bE9PVL6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim30bE9PVL6 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30bE9PVL6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30bE9PVL6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30bE9PVL6 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.79□□□□□ -0.36
Trim30bE9PVL6 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.79□□□□□ -0.36
Trim30bE9PVL6 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms