Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Hfm1D3Z4R1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Gm8146-201ENSMUST00000192106 1847 ntBASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Gm44216-201ENSMUST00000203942 157 ntBASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Gm44953-201ENSMUST00000208745 1286 ntBASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 BC106175-202ENSMUST00000219344 1213 ntBASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Gm7525-201ENSMUST00000219425 454 ntBASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Gm38089-201ENSMUST00000193585 1514 ntBASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Gm5780-201ENSMUST00000217774 1834 ntBASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hfm1D3Z4R1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm22594-201ENSMUST00000104251 130 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm16167-201ENSMUST00000160428 1065 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm23694-201ENSMUST00000179335 110 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm18210-201ENSMUST00000209001 1524 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Rab3c-202ENSMUST00000223922 2398 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Adra1a-206ENSMUST00000225182 2337 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm37437-201ENSMUST00000194451 1937 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm23612-201ENSMUST00000103823 110 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm20495-201ENSMUST00000173902 235 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm25677-201ENSMUST00000174983 72 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms