Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm14193-201ENSMUST00000105067 153 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Mt1-202ENSMUST00000211807 1085 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm24891-201ENSMUST00000104391 136 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm26013-201ENSMUST00000104404 119 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm12419-201ENSMUST00000116649 636 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm13916-201ENSMUST00000117368 628 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm11354-201ENSMUST00000121974 422 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm13182-201ENSMUST00000122241 312 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm3150-201ENSMUST00000166418 204 ntBASIC10.8□□□□□ -0.68
Shank1D3YZU1 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.8□□□□□ -0.68
Shank1D3YZU1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Gm15566-201ENSMUST00000121130 590 ntBASIC10.79□□□□□ -0.68
Shank1D3YZU1 Gm24844-201ENSMUST00000158679 127 ntBASIC10.79□□□□□ -0.68
Shank1D3YZU1 Gm6722-201ENSMUST00000221586 390 ntBASIC10.79□□□□□ -0.68
Shank1D3YZU1 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Shank1D3YZU1 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms