Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Gm38228-201ENSMUST00000193169 1293 ntBASIC16.27■□□□□ 0.2
Tmf1B9EKI3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.27■□□□□ 0.2
Tmf1B9EKI3 Gm4482-201ENSMUST00000200876 742 ntBASIC16.27■□□□□ 0.2
Tmf1B9EKI3 Gm45118-201ENSMUST00000208928 825 ntBASIC16.27■□□□□ 0.2
Tmf1B9EKI3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC16.27■□□□□ 0.2
Tmf1B9EKI3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC16.27■□□□□ 0.2
Tmf1B9EKI3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tmf1B9EKI3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tmf1B9EKI3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC16.27■□□□□ 0.19
Tmf1B9EKI3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tmf1B9EKI3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Tmf1B9EKI3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Tmf1B9EKI3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Tmf1B9EKI3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Tmf1B9EKI3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Gm4310-201ENSMUST00000177847 889 ntBASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Gm8100-201ENSMUST00000182906 988 ntBASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Gm9192-201ENSMUST00000183221 985 ntBASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Gm27438-201ENSMUST00000183480 110 ntBASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Gm28686-201ENSMUST00000187404 609 ntBASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Gm2965-201ENSMUST00000198365 343 ntBASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.26■□□□□ 0.19
Tmf1B9EKI3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 AC151275.1-201ENSMUST00000224870 585 ntBASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tmf1B9EKI3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Gm14058-201ENSMUST00000116082 735 ntBASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Gm14441-201ENSMUST00000121960 540 ntBASIC16.25■□□□□ 0.19
Tmf1B9EKI3 n-R5s14-201ENSMUST00000122688 107 ntBASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC16.25■□□□□ 0.19
Tmf1B9EKI3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC16.25■□□□□ 0.19
Tmf1B9EKI3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tmf1B9EKI3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Gm43365-201ENSMUST00000196522 2106 ntBASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Gm45428-201ENSMUST00000209619 1789 ntBASIC16.24■□□□□ 0.19
Tmf1B9EKI3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Gm5733-201ENSMUST00000190232 939 ntBASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms