Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.16□□□□□ -0.46
Rrn3B2RS91 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Gm14017-201ENSMUST00000121934 386 ntBASIC12.16□□□□□ -0.46
Rrn3B2RS91 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.16□□□□□ -0.46
Rrn3B2RS91 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.16□□□□□ -0.46
Rrn3B2RS91 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.16□□□□□ -0.46
Rrn3B2RS91 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Rrn3B2RS91 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.16□□□□□ -0.46
Rrn3B2RS91 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.16□□□□□ -0.46
Rrn3B2RS91 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rrn3B2RS91 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.15□□□□□ -0.46
Rrn3B2RS91 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Gm11989-201ENSMUST00000117240 672 ntBASIC12.15□□□□□ -0.46
Rrn3B2RS91 Gm11362-201ENSMUST00000118838 850 ntBASIC12.15□□□□□ -0.46
Rrn3B2RS91 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rrn3B2RS91 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.15□□□□□ -0.46
Rrn3B2RS91 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.15□□□□□ -0.46
Rrn3B2RS91 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.15□□□□□ -0.46
Rrn3B2RS91 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.15□□□□□ -0.46
Rrn3B2RS91 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.15□□□□□ -0.46
Rrn3B2RS91 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.14□□□□□ -0.47
Rrn3B2RS91 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rrn3B2RS91 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms